Logo

Passion Fuels Purpose! 

BIOGRAPHY

Hi, I'm Pritam, an accomplished bioinformatician and researcher specializing in drug design, molecular modeling, and AI-driven protein design, NGS, multimomics and workflow management. Originally from India and currently based in San Francisco, California, he holds a Ph.D. in Physics, specializing in Atomic, Molecular, and Condensed Matter Physics from Uppsala University in Sweden, where his research bridged quantum and biological phenomena.

Currently, I work as a Postdoctoral Scholar in the Department of Anesthesiology, Perioperative, and Pain Medicine at Stanford University School of Medicine. My current research is centered on designing novel anesthetics suitable for battlefield conditions. Leveraging AI-driven protein design and high-throughput virtual screening, I bring my expertise to accelerate the drug discovery process and develop effective anesthetic agents.

Whether I'm working with genomic datasets, protein structures, or other bioinformatics challenges, I bring my commitment to analytical precision and data-driven problem-solving to every project I undertake.

Codebucks
+

Publications

+

Projects completed

+

Years of experience

Skills

Bioinformatics
Git
NGS
Docker/Singularity
Python
R/Shiny
Nextflow
Molecular Dynamics
ML/AI
Snakemake
Multiomics
Web Design
Workflow Management
Drug Designing
Molecular Modeling

Experience

  • Postdoctoral Scholar @Stanford University

    Jan 2025-present | California, USA

    Spearheaded innovative research at the department of Anesthesiology, Perioperative and Pain Medicine, Stanford University School of Medicine focused on the design of battlefield-optimized anesthetics using AI-driven protein design, molecular dynamics simulations, and computational drug design to enhance anesthetic efficacy and adaptability in extreme conditions.

  • Bioinformatician @German Cancer Research Center DKFZ

    July 2023-Dec 2024 | Heidelberg, Germany

    Managed large-scale big data projects, automating NGS analysis pipelines, optimizing sequencing workflows with the DKFZ One Touch Pipeline database and leading multidisciplinary teams. Translating/piloting common bioinformatics tools to applications suitable for non-bioinformatics biologists and clinicians to query and interpret the molecular/clinical data.

  • Bioinformatics Engineer | UI/UX Designer @Helmholtz-Institute for Translational Oncology Mainz (HI-TRON)

    July 2023-Dec 2024 | Mainz, Germany

    Implemented the HI-TRON data portal backend & frontend, enhancing data accessibility and user experience through MOLGENIS, VueJs and FAIR practices & and collect feedback and feature requirements from researchers including biologists, clinical trial designers and clinicians.

  • Bioinformatics Consultant @Colgate & Palmolive

    Nov 2021-Jun 2023 | Piscataway-NJ, USA

    Collaborated on developing a pipeline for combinatorial synergy-based drug design targeting photoaging and hyperpigmentation, which led to the publication of an article showcasing the innovative approach and findings. Demonstrated expertise in drug discovery research, with a strong focus on Computer-Aided Drug Design (CADD) methodologies and techniques.

  • Founder & CEO @Nerdalytics

    Dec 2021-Jul 2023 | Uppsala, Sweden

    Founded a project management startup specializing in bioinformatics consultancy for pharmaceutical industries, aligning services with industry demands. Adapted company policies, regulations, and financial strategies to effectively manage multiple projects, ensuring long-term viability and sustainability. Led budgeting, coordination, and development of confidential projects with pharmaceutical companies, focusing on defining project scope, cost estimation, and key deliverables.

  • Hackathon Organizer @LongHack

    Jun 2021-Sep 2022 | Helsinki, Finland

    Spearheaded the organization of two successful hackathons focused on longevity, showcasing strong leadership and project management skills. Played a key role in identifying potential customers and expanding networks, fostering valuable connections within the scientific and entrepreneurial communities through the hackathon platform. Guided and supported participants throughout the hackathon process,ensuring their understanding and addressing their needs effectively.

  • Clinical Consultant @Breath of Health

    Nov 2021-Dec 2022 | Cambridge, Massachusetts, USA

    Experienced in developing machine learning models and pipelines tailored for next-generation sequencing (NGS) data analysis and automation from exhaled breath samples , optimizing workflows to enhance efficiency and accuracy in proteomics research. Proficient in supporting clinical and bioinformatics data analysis, contributing to successful funding acquisition and research initiatives.

  • Bioinformatics Consultant @Inflanova AB

    Aug 2021-Mar 2023 | Stockholm, Sweden

    Utilized multiomics and bioinformatics approaches to develop innovative strategies for vaccine design and therapeutic interventions. Played a pivotal role in identifying potential clients within industrial sectors interested in vaccine formulation by leveraging market research and networking skills to establish connections and initiate discussions with prospective partners. Filed a patent WO2023217787 for a clinical vaccine candidate targeting antiviral therapy.

  • Affiliated Researcher @Karolinska Institute

    Mar 2021-Mar 2023 | Stockholm, Sweden

    Implemented immunoinformatics pipelines for modeling in-house antibody clones, enabling antibody profiling and simulation to understand the immunomodulatory effects in cardiovascular-related disorders. Enhanced patient stratification and biomarker selection in clinical trials by developing novel predictive models using statistical techniques and machine learning on complex clinical data, including genomic data and antibody clones from patient samples.

  • Doctoral Researcher @Uppsala University

    Nov 2018-Mar 2023 | Uppsala, Sweden

    Developed a multi-scale modeling pipeline, enhancing computational efficiency and accuracy by utilizing molecular dynamics simulations on proteins, nanomaterials, complexes, and membrane models. Bridged quantum and biological behaviors of bio-inspired materials by establishing links to understand interface chemistry, focusing on 2D materials modeling.

  • NGS Data Analyst @University Medical Center, University of Freiburg

    Sep 2017-Oct 2018 | Freiburg im Breisgau, Germany

    Enhanced clinical diagnostics for Myelodysplastic Syndromes by developing and validating whole exome sequencing (WES) and NEBNext Direct clinical cancer hotspot panel pipelines, focusing on accurate variant identification and annotation. Spearheaded a collaborative research project to design and analyze WES and gene-expression data using RNA-seq pipelines, leading to significant performance improvements.

  • YouTuber @Bioinformatics Copilot

    Jan 2017-present | California, USA

    Provides in-depth tutorials on bioinformatics tools, techniques, and software, suitable for beginners and advanced users.

Education